Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Abcd3P55096 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Abcd3P55096 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Abcd3P55096 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Abcd3P55096 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Gm14028-201ENSMUST00000117434 479 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.26□□□□□ -0.77
Abcd3P55096 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.26□□□□□ -0.77
Abcd3P55096 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.26□□□□□ -0.77
Abcd3P55096 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Abcd3P55096 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.26□□□□□ -0.77
Abcd3P55096 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Gm27341-201ENSMUST00000183570 106 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm28450-201ENSMUST00000187349 638 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm29499-201ENSMUST00000189151 486 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm5733-201ENSMUST00000190232 939 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm28329-201ENSMUST00000191208 689 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm29171-201ENSMUST00000191397 486 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Abcd3P55096 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 AU022133-201ENSMUST00000200601 873 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Gm3786-201ENSMUST00000202659 378 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Abcd3P55096 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Abcd3P55096 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.26□□□□□ -0.77
Abcd3P55096 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.26□□□□□ -0.77
Abcd3P55096 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Abcd3P55096 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.25□□□□□ -0.77
Abcd3P55096 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.25□□□□□ -0.77
Abcd3P55096 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Abcd3P55096 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm14058-201ENSMUST00000116082 735 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.25□□□□□ -0.77
Abcd3P55096 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm3150-201ENSMUST00000166418 204 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.25□□□□□ -0.77
Abcd3P55096 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.25□□□□□ -0.77
Abcd3P55096 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms