Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Msh6P54276 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Gm15196-201ENSMUST00000121406 482 ntBASIC14.46□□□□□ -0.1
Msh6P54276 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Msh6P54276 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC14.46□□□□□ -0.1
Msh6P54276 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.46□□□□□ -0.1
Msh6P54276 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.46□□□□□ -0.1
Msh6P54276 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.46□□□□□ -0.1
Msh6P54276 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.46□□□□□ -0.1
Msh6P54276 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Msh6P54276 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.45□□□□□ -0.1
Msh6P54276 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.45□□□□□ -0.1
Msh6P54276 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Gm33366-201ENSMUST00000195583 3827 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Msh6P54276 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Msh6P54276 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Msh6P54276 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Gm25226-201ENSMUST00000158198 123 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Msh6P54276 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Gm44323-201ENSMUST00000198689 129 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Gm18035-201ENSMUST00000211962 589 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Gm14005-208ENSMUST00000223654 681 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.45□□□□□ -0.1
Msh6P54276 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Msh6P54276 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.44□□□□□ -0.1
Msh6P54276 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Msh6P54276 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.44□□□□□ -0.1
Msh6P54276 Gm13284-201ENSMUST00000121020 547 ntBASIC14.44□□□□□ -0.1
Msh6P54276 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.44□□□□□ -0.1
Msh6P54276 Gm25998-201ENSMUST00000175397 53 ntBASIC14.44□□□□□ -0.1
Msh6P54276 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Gm9353-201ENSMUST00000200472 604 ntBASIC14.44□□□□□ -0.1
Msh6P54276 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Gm9487-201ENSMUST00000216600 472 ntBASIC14.44□□□□□ -0.1
Msh6P54276 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Msh6P54276 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.44□□□□□ -0.1
Msh6P54276 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Msh6P54276 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Msh6P54276 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.43□□□□□ -0.1
Msh6P54276 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms