Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shmt1P50431 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.11□□□□□ -0.47
Shmt1P50431 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Gm14395-201ENSMUST00000120494 563 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Gm8194-201ENSMUST00000159783 859 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm28388-201ENSMUST00000186262 437 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt1P50431 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.11□□□□□ -0.47
Shmt1P50431 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm1848-201ENSMUST00000120711 789 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Gm21778-201ENSMUST00000178779 471 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Mir7076-201ENSMUST00000183519 74 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm43966-201ENSMUST00000203301 612 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shmt1P50431 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shmt1P50431 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shmt1P50431 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.1□□□□□ -0.47
Shmt1P50431 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt1P50431 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.09□□□□□ -0.47
Shmt1P50431 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt1P50431 Olfml3-204ENSMUST00000169286 874 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Gm23694-201ENSMUST00000179335 110 ntBASIC12.09□□□□□ -0.47
Shmt1P50431 Gm9358-201ENSMUST00000183067 927 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms