Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Rfx3P48381 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm13996-201ENSMUST00000118456 430 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Gm15808-201ENSMUST00000119046 604 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Gm11960-201ENSMUST00000122068 925 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm8343-201ENSMUST00000182705 994 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm43184-201ENSMUST00000197247 542 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Rps4l-202ENSMUST00000204242 789 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rfx3P48381 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rfx3P48381 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.36□□□□□ -0.75
Rfx3P48381 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rfx3P48381 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rfx3P48381 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rfx3P48381 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Rfx3P48381 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm14130-201ENSMUST00000118417 987 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.35□□□□□ -0.75
Rfx3P48381 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm5616-201ENSMUST00000165252 384 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm8741-201ENSMUST00000174736 384 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm38314-201ENSMUST00000195709 625 ntBASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms