Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.87□□□□□ -0.67
Nkx2-6P43688 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-6P43688 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-6P43688 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm12274-201ENSMUST00000120062 385 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm38314-201ENSMUST00000195709 625 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.86□□□□□ -0.67
Nkx2-6P43688 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx2-6P43688 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm25880-201ENSMUST00000104331 132 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm25063-201ENSMUST00000104666 94 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm6771-201ENSMUST00000182716 1001 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm7504-201ENSMUST00000201449 424 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm18065-201ENSMUST00000221395 526 ntBASIC10.85□□□□□ -0.67
Nkx2-6P43688 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx2-6P43688 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms