Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm26361-201ENSMUST00000158868 186 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm43758-201ENSMUST00000199500 367 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.04□□□□□ -0.64
Tnfsf4P43488 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Tnfsf4P43488 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.03□□□□□ -0.64
Tnfsf4P43488 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tnfsf4P43488 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms