Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx2P43241 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx2P43241 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Cdx2P43241 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cdx2P43241 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx2P43241 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx2P43241 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cdx2P43241 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cdx2P43241 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.9□□□□□ -0.67
Cdx2P43241 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cdx2P43241 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Cdx2P43241 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Cdx2P43241 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cdx2P43241 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.89□□□□□ -0.67
Cdx2P43241 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm25562-201ENSMUST00000104608 133 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm12389-201ENSMUST00000117696 418 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm9133-201ENSMUST00000118289 540 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm13284-201ENSMUST00000121020 547 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.89□□□□□ -0.67
Cdx2P43241 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm25343-201ENSMUST00000157460 107 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdx2P43241 Mir7035-201ENSMUST00000184713 82 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm43610-201ENSMUST00000199117 365 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm44814-201ENSMUST00000207018 434 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Gm18035-201ENSMUST00000211962 589 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm8894-201ENSMUST00000074642 666 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdx2P43241 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.89□□□□□ -0.67
Cdx2P43241 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdx2P43241 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cdx2P43241 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdx2P43241 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdx2P43241 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdx2P43241 Gm25604-201ENSMUST00000158359 133 ntBASIC10.88□□□□□ -0.67
Cdx2P43241 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms