Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gm13996-201ENSMUST00000118456 430 ntBASIC10.78□□□□□ -0.68
Sox6P40645 Gm15808-201ENSMUST00000119046 604 ntBASIC10.78□□□□□ -0.68
Sox6P40645 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.78□□□□□ -0.68
Sox6P40645 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.78□□□□□ -0.68
Sox6P40645 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox6P40645 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Gm44262-201ENSMUST00000204969 372 ntBASIC10.78□□□□□ -0.68
Sox6P40645 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox6P40645 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Sox6P40645 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sox6P40645 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sox6P40645 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.68
Sox6P40645 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.77□□□□□ -0.68
Sox6P40645 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.77□□□□□ -0.68
Sox6P40645 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.77□□□□□ -0.68
Sox6P40645 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sox6P40645 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Sox6P40645 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Gm22133-201ENSMUST00000102082 109 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.77□□□□□ -0.69
Sox6P40645 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.77□□□□□ -0.69
Sox6P40645 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Gm5706-201ENSMUST00000181525 993 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm29615-201ENSMUST00000185371 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28224-201ENSMUST00000186078 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm29001-201ENSMUST00000186177 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28292-201ENSMUST00000186593 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28101-201ENSMUST00000187608 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm29076-201ENSMUST00000187689 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28302-201ENSMUST00000187931 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28646-201ENSMUST00000188220 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28205-201ENSMUST00000189177 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm29032-201ENSMUST00000189797 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm28695-201ENSMUST00000190300 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm37448-201ENSMUST00000192795 697 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Gm45433-201ENSMUST00000209386 247 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm8913-201ENSMUST00000209491 641 ntBASIC10.77□□□□□ -0.69
Sox6P40645 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.77□□□□□ -0.69
Sox6P40645 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Sox6P40645 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sox6P40645 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.77□□□□□ -0.69
Sox6P40645 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms