Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm25148-201ENSMUST00000104611 123 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm12736-201ENSMUST00000119330 236 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm8152-201ENSMUST00000120842 637 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm23647-201ENSMUST00000175042 109 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Rn5s-201ENSMUST00000177555 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm22109-201ENSMUST00000177995 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm22291-201ENSMUST00000178027 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm23284-201ENSMUST00000178069 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm25018-201ENSMUST00000179081 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm25212-201ENSMUST00000179432 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm26391-201ENSMUST00000179843 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm29304-201ENSMUST00000186555 695 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm29223-201ENSMUST00000188867 695 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm37921-201ENSMUST00000194333 695 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gm24089-201ENSMUST00000093696 109 ntBASIC11.78□□□□□ -0.52
Cxcl12P40224 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Cxcl12P40224 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Paupar-201ENSMUST00000194826 3482 ntBASIC11.77□□□□□ -0.52
Cxcl12P40224 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Cxcl12P40224 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.77□□□□□ -0.52
Cxcl12P40224 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cxcl12P40224 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm23132-201ENSMUST00000104254 132 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm18733-202ENSMUST00000174447 401 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Mir6387-201ENSMUST00000184042 108 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.77□□□□□ -0.53
Cxcl12P40224 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.77□□□□□ -0.53
Cxcl12P40224 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms