Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Gm8255-201ENSMUST00000218693 305 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Gm26670-202ENSMUST00000226862 340 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vcam1P29533 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.13□□□□□ -0.31
Vcam1P29533 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Vcam1P29533 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vcam1P29533 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC13.12□□□□□ -0.31
Vcam1P29533 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm12663-201ENSMUST00000118481 958 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.12□□□□□ -0.31
Vcam1P29533 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm5700-201ENSMUST00000191483 989 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm6423-201ENSMUST00000204315 934 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm2594-201ENSMUST00000214774 742 ntBASIC13.12□□□□□ -0.31
Vcam1P29533 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vcam1P29533 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vcam1P29533 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vcam1P29533 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.12□□□□□ -0.31
Vcam1P29533 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vcam1P29533 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcam1P29533 Gm24791-201ENSMUST00000104284 131 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcam1P29533 Gm4917-201ENSMUST00000121452 650 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.11□□□□□ -0.31
Vcam1P29533 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.11□□□□□ -0.31
Vcam1P29533 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Mir7035-201ENSMUST00000184713 82 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Gm9487-201ENSMUST00000216600 472 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.11□□□□□ -0.31
Vcam1P29533 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Capsl-202ENSMUST00000226688 739 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcam1P29533 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcam1P29533 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vcam1P29533 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.11□□□□□ -0.31
Vcam1P29533 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vcam1P29533 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms