Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm18730-201ENSMUST00000218038 343 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm8385-201ENSMUST00000058999 643 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.6□□□□□ -0.87
Tnfrsf1aP25118 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm11783-201ENSMUST00000119549 885 ntBASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm10254-201ENSMUST00000052888 867 ntBASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Tnfrsf1aP25118 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Tnfrsf1aP25118 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.88
Tnfrsf1aP25118 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Tnfrsf1aP25118 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms