Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pde6bP23440 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.58□□□□□ -0.39
Pde6bP23440 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Pde6bP23440 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Pde6bP23440 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Pde6bP23440 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pde6bP23440 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm15615-201ENSMUST00000118876 198 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.58□□□□□ -0.4
Pde6bP23440 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Gm8531-201ENSMUST00000188319 893 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm44158-201ENSMUST00000203881 505 ntBASIC12.58□□□□□ -0.4
Pde6bP23440 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.58□□□□□ -0.4
Pde6bP23440 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.58□□□□□ -0.4
Pde6bP23440 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pde6bP23440 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.58□□□□□ -0.4
Pde6bP23440 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm11340-201ENSMUST00000119226 412 ntBASIC12.57□□□□□ -0.4
Pde6bP23440 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pde6bP23440 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm5298-201ENSMUST00000201122 892 ntBASIC12.57□□□□□ -0.4
Pde6bP23440 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.57□□□□□ -0.4
Pde6bP23440 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms