Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.83□□□□□ -0.68
TP20293 Gm8815-201ENSMUST00000173809 620 ntBASIC10.83□□□□□ -0.68
TP20293 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.83□□□□□ -0.68
TP20293 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.83□□□□□ -0.68
TP20293 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.83□□□□□ -0.68
TP20293 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.83□□□□□ -0.68
TP20293 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.83□□□□□ -0.68
TP20293 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.83□□□□□ -0.68
TP20293 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
TP20293 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.83□□□□□ -0.68
TP20293 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TP20293 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.82□□□□□ -0.68
TP20293 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.82□□□□□ -0.68
TP20293 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.82□□□□□ -0.68
TP20293 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.82□□□□□ -0.68
TP20293 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.82□□□□□ -0.68
TP20293 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
TP20293 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Gm13035-201ENSMUST00000117496 342 ntBASIC10.82□□□□□ -0.68
TP20293 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TP20293 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.82□□□□□ -0.68
TP20293 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TP20293 Gm25732-201ENSMUST00000175168 60 ntBASIC10.82□□□□□ -0.68
TP20293 Mir6927-201ENSMUST00000184494 71 ntBASIC10.82□□□□□ -0.68
TP20293 Gm28937-201ENSMUST00000185413 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm29400-201ENSMUST00000187208 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm28662-201ENSMUST00000188446 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm28251-201ENSMUST00000188835 695 ntBASIC10.82□□□□□ -0.68
TP20293 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.82□□□□□ -0.68
TP20293 Gm37318-201ENSMUST00000194325 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm38017-201ENSMUST00000194768 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm37287-201ENSMUST00000195449 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm37793-201ENSMUST00000195548 695 ntBASIC10.82□□□□□ -0.68
TP20293 Gm38314-201ENSMUST00000195709 625 ntBASIC10.82□□□□□ -0.68
TP20293 Gm5714-201ENSMUST00000197343 566 ntBASIC10.82□□□□□ -0.68
TP20293 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.82□□□□□ -0.68
TP20293 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.82□□□□□ -0.68
TP20293 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.82□□□□□ -0.68
TP20293 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.82□□□□□ -0.68
TP20293 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.82□□□□□ -0.68
TP20293 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.82□□□□□ -0.68
TP20293 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
TP20293 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TP20293 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TP20293 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TP20293 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.81□□□□□ -0.68
TP20293 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TP20293 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TP20293 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.81□□□□□ -0.68
TP20293 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TP20293 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
TP20293 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.81□□□□□ -0.68
TP20293 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.81□□□□□ -0.68
TP20293 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms