Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.57□□□□□ -0.56
VimP20152 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.57□□□□□ -0.56
VimP20152 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VimP20152 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
VimP20152 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
VimP20152 Nln-205ENSMUST00000224945 2486 ntBASIC11.57□□□□□ -0.56
VimP20152 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
VimP20152 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
VimP20152 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
VimP20152 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
VimP20152 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.56□□□□□ -0.56
VimP20152 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.56□□□□□ -0.56
VimP20152 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.56□□□□□ -0.56
VimP20152 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.56□□□□□ -0.56
VimP20152 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VimP20152 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VimP20152 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Gm6714-201ENSMUST00000218677 2330 ntBASIC11.55□□□□□ -0.56
VimP20152 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.55□□□□□ -0.56
VimP20152 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.55□□□□□ -0.56
VimP20152 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Gm12859-201ENSMUST00000117834 427 ntBASIC11.55□□□□□ -0.56
VimP20152 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.55□□□□□ -0.56
VimP20152 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.55□□□□□ -0.56
VimP20152 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.55□□□□□ -0.56
VimP20152 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.55□□□□□ -0.56
VimP20152 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Gm18187-201ENSMUST00000196476 984 ntBASIC11.55□□□□□ -0.56
VimP20152 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.55□□□□□ -0.56
VimP20152 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.55□□□□□ -0.56
VimP20152 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
VimP20152 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
VimP20152 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
VimP20152 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms