Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.4□□□□□ -0.42
RaraP11416 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.4□□□□□ -0.42
RaraP11416 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RaraP11416 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.4□□□□□ -0.42
RaraP11416 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RaraP11416 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RaraP11416 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RaraP11416 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RaraP11416 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
RaraP11416 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RaraP11416 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RaraP11416 Gm12463-201ENSMUST00000118271 849 ntBASIC12.39□□□□□ -0.43
RaraP11416 Gm13350-201ENSMUST00000120519 479 ntBASIC12.39□□□□□ -0.43
RaraP11416 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.39□□□□□ -0.43
RaraP11416 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.39□□□□□ -0.43
RaraP11416 Gm25668-201ENSMUST00000157700 129 ntBASIC12.39□□□□□ -0.43
RaraP11416 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Gm38151-201ENSMUST00000195085 289 ntBASIC12.39□□□□□ -0.43
RaraP11416 Gm5714-201ENSMUST00000197343 566 ntBASIC12.39□□□□□ -0.43
RaraP11416 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.39□□□□□ -0.43
RaraP11416 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.39□□□□□ -0.43
RaraP11416 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RaraP11416 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Olfr582-201ENSMUST00000098212 960 ntBASIC12.39□□□□□ -0.43
RaraP11416 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.39□□□□□ -0.43
RaraP11416 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.39□□□□□ -0.43
RaraP11416 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.39□□□□□ -0.43
RaraP11416 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RaraP11416 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RaraP11416 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RaraP11416 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.38□□□□□ -0.43
RaraP11416 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.38□□□□□ -0.43
RaraP11416 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.38□□□□□ -0.43
RaraP11416 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.38□□□□□ -0.43
RaraP11416 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Gm8566-201ENSMUST00000120174 465 ntBASIC12.38□□□□□ -0.43
RaraP11416 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.38□□□□□ -0.43
RaraP11416 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.38□□□□□ -0.43
RaraP11416 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.38□□□□□ -0.43
RaraP11416 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RaraP11416 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.38□□□□□ -0.43
RaraP11416 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.38□□□□□ -0.43
RaraP11416 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Gm45575-201ENSMUST00000210283 548 ntBASIC12.38□□□□□ -0.43
RaraP11416 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.38□□□□□ -0.43
RaraP11416 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.38□□□□□ -0.43
RaraP11416 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RaraP11416 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms