Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm5714-201ENSMUST00000197343 566 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm7940-201ENSMUST00000218195 769 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm15432-201ENSMUST00000121106 195 ntBASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm13263-201ENSMUST00000121271 838 ntBASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Chmp6P0C0A3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Gm19353-201ENSMUST00000184561 445 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.48□□□□□ -0.41
Chmp6P0C0A3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.48□□□□□ -0.41
Chmp6P0C0A3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms