Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.23□□□□□ -0.77
P06344 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gm10731-201ENSMUST00000181171 448 ntBASIC10.23□□□□□ -0.77
P06344 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.23□□□□□ -0.77
P06344 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.23□□□□□ -0.77
P06344 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.23□□□□□ -0.77
P06344 Gm45550-201ENSMUST00000209380 946 ntBASIC10.23□□□□□ -0.77
P06344 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.23□□□□□ -0.77
P06344 Gm18065-201ENSMUST00000221395 526 ntBASIC10.23□□□□□ -0.77
P06344 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.23□□□□□ -0.77
P06344 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.23□□□□□ -0.77
P06344 Olfr584-201ENSMUST00000098210 964 ntBASIC10.23□□□□□ -0.77
P06344 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.23□□□□□ -0.77
P06344 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P06344 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
P06344 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.22□□□□□ -0.77
P06344 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
P06344 Gm12247-201ENSMUST00000117585 670 ntBASIC10.22□□□□□ -0.77
P06344 Gm11500-201ENSMUST00000118237 601 ntBASIC10.22□□□□□ -0.77
P06344 Gm16166-201ENSMUST00000118291 787 ntBASIC10.22□□□□□ -0.77
P06344 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Gm14460-201ENSMUST00000121511 639 ntBASIC10.22□□□□□ -0.77
P06344 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.22□□□□□ -0.77
P06344 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.22□□□□□ -0.77
P06344 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.22□□□□□ -0.77
P06344 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.22□□□□□ -0.77
P06344 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
P06344 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.22□□□□□ -0.77
P06344 Gm37981-201ENSMUST00000194280 535 ntBASIC10.22□□□□□ -0.77
P06344 Gm7504-201ENSMUST00000201449 424 ntBASIC10.22□□□□□ -0.77
P06344 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.22□□□□□ -0.77
P06344 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.22□□□□□ -0.77
P06344 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.22□□□□□ -0.77
P06344 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.22□□□□□ -0.77
P06344 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.22□□□□□ -0.77
P06344 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
P06344 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
P06344 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
P06344 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
P06344 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
P06344 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
P06344 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.21□□□□□ -0.77
P06344 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
P06344 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 224 ms