Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P04940 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P04940 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
P04940 Gm15329-201ENSMUST00000121408 155 ntBASIC9.28□□□□□ -0.92
P04940 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.28□□□□□ -0.92
P04940 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.28□□□□□ -0.92
P04940 Gm43852-201ENSMUST00000202098 917 ntBASIC9.28□□□□□ -0.92
P04940 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
P04940 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.28□□□□□ -0.92
P04940 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.28□□□□□ -0.92
P04940 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.28□□□□□ -0.92
P04940 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
P04940 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.28□□□□□ -0.92
P04940 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
P04940 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.28□□□□□ -0.92
P04940 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.28□□□□□ -0.92
P04940 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
P04940 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.28□□□□□ -0.92
P04940 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
P04940 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
P04940 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
P04940 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
P04940 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
P04940 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
P04940 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
P04940 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.27□□□□□ -0.93
P04940 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC9.27□□□□□ -0.93
P04940 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.27□□□□□ -0.93
P04940 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
P04940 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Gm15352-201ENSMUST00000118696 270 ntBASIC9.27□□□□□ -0.93
P04940 Gm13045-201ENSMUST00000119019 712 ntBASIC9.27□□□□□ -0.93
P04940 Gm9089-201ENSMUST00000122027 526 ntBASIC9.27□□□□□ -0.93
P04940 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Gm18367-201ENSMUST00000176139 600 ntBASIC9.27□□□□□ -0.93
P04940 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.27□□□□□ -0.93
P04940 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.27□□□□□ -0.93
P04940 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.27□□□□□ -0.93
P04940 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.27□□□□□ -0.93
P04940 Gm8574-201ENSMUST00000203207 924 ntBASIC9.27□□□□□ -0.93
P04940 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.27□□□□□ -0.93
P04940 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.27□□□□□ -0.93
P04940 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.27□□□□□ -0.93
P04940 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.27□□□□□ -0.93
P04940 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.27□□□□□ -0.93
P04940 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
P04940 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
P04940 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
P04940 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
P04940 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.27□□□□□ -0.93
P04940 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
P04940 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms