Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.61□□□□□ -0.07
Ubr1O70481 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC14.61□□□□□ -0.07
Ubr1O70481 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr1O70481 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ubr1O70481 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Gm20493-201ENSMUST00000173706 213 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Gm37207-201ENSMUST00000194284 296 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Gm9204-201ENSMUST00000212641 947 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Gm7183-201ENSMUST00000213870 1005 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
Ubr1O70481 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Gm42779-201ENSMUST00000198807 406 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.6□□□□□ -0.07
Ubr1O70481 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Gm18042-201ENSMUST00000219887 790 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 AC154407.1-201ENSMUST00000226777 526 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Rps3a2-201ENSMUST00000074245 792 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Rps3a3-201ENSMUST00000074680 795 ntBASIC14.6□□□□□ -0.07
Ubr1O70481 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ubr1O70481 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ubr1O70481 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Ubr1O70481 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Gm11993-201ENSMUST00000121861 820 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Gm24346-201ENSMUST00000158712 194 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 CT030195.2-201ENSMUST00000226074 1286 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ubr1O70481 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ubr1O70481 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.59□□□□□ -0.07
Ubr1O70481 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ubr1O70481 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.58□□□□□ -0.07
Ubr1O70481 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Ubr1O70481 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ubr1O70481 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ubr1O70481 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm23745-201ENSMUST00000104230 125 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 Gm23675-201ENSMUST00000157311 125 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.58□□□□□ -0.08
Ubr1O70481 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr1O70481 Mir6387-201ENSMUST00000184042 108 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.58□□□□□ -0.08
Ubr1O70481 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 BC080696-201ENSMUST00000202858 1218 ntBASIC14.58□□□□□ -0.08
Ubr1O70481 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ubr1O70481 AC158986.2-201ENSMUST00000227487 618 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms