Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Slc1a6O35544 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc1a6O35544 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc1a6O35544 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc1a6O35544 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc1a6O35544 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Slc1a6O35544 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc1a6O35544 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Slc1a6O35544 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Slc1a6O35544 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm8343-201ENSMUST00000182705 994 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm31256-201ENSMUST00000194705 506 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Olfr284-202ENSMUST00000206647 966 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm45880-201ENSMUST00000213041 853 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.27□□□□□ -0.61
Slc1a6O35544 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.27□□□□□ -0.61
Slc1a6O35544 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Slc1a6O35544 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.27□□□□□ -0.61
Slc1a6O35544 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.26□□□□□ -0.61
Slc1a6O35544 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm27046-201ENSMUST00000182160 463 ntBASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.26□□□□□ -0.61
Slc1a6O35544 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.26□□□□□ -0.61
Slc1a6O35544 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Slc1a6O35544 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.25□□□□□ -0.61
Slc1a6O35544 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Slc1a6O35544 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Gm22133-201ENSMUST00000102082 109 ntBASIC11.25□□□□□ -0.61
Slc1a6O35544 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Slc1a6O35544 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Slc1a6O35544 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.25□□□□□ -0.61
Slc1a6O35544 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.25□□□□□ -0.61
Slc1a6O35544 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.25□□□□□ -0.61
Slc1a6O35544 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Slc1a6O35544 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms