Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Alx4O35137 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Alx4O35137 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Alx4O35137 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Alx4O35137 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Alx4O35137 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.23□□□□□ -0.77
Alx4O35137 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Alx4O35137 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.23□□□□□ -0.77
Alx4O35137 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.23□□□□□ -0.77
Alx4O35137 Gm27046-201ENSMUST00000182160 463 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm37424-201ENSMUST00000191727 561 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.23□□□□□ -0.77
Alx4O35137 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Alx4O35137 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Alx4O35137 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.23□□□□□ -0.77
Alx4O35137 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Alx4O35137 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Alx4O35137 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Alx4O35137 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Alx4O35137 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Alx4O35137 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Alx4O35137 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Alx4O35137 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Alx4O35137 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.22□□□□□ -0.77
Alx4O35137 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.22□□□□□ -0.77
Alx4O35137 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
Alx4O35137 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Alx4O35137 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gm37597-201ENSMUST00000191853 382 ntBASIC10.22□□□□□ -0.77
Alx4O35137 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gm21769-201ENSMUST00000211922 111 ntBASIC10.22□□□□□ -0.77
Alx4O35137 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.22□□□□□ -0.77
Alx4O35137 Gm9797-202ENSMUST00000218003 294 ntBASIC10.22□□□□□ -0.77
Alx4O35137 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.22□□□□□ -0.77
Alx4O35137 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.22□□□□□ -0.77
Alx4O35137 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.22□□□□□ -0.77
Alx4O35137 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Alx4O35137 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms