Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm10171-201ENSMUST00000126220 628 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Gm5808-201ENSMUST00000178090 357 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Gm28032-201ENSMUST00000184104 96 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 Saa-ps-201ENSMUST00000211148 320 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Gm10233-201ENSMUST00000089275 628 ntBASIC17.34■□□□□ 0.37
Polr1aO35134 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC17.34■□□□□ 0.37
Polr1aO35134 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Polr1aO35134 AC153524.2-202ENSMUST00000220401 1794 ntBASIC17.33■□□□□ 0.37
Polr1aO35134 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Polr1aO35134 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC17.33■□□□□ 0.37
Polr1aO35134 Gm7964-201ENSMUST00000051522 1378 ntBASIC17.33■□□□□ 0.37
Polr1aO35134 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Polr1aO35134 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Polr1aO35134 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Polr1aO35134 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC17.33■□□□□ 0.37
Polr1aO35134 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Polr1aO35134 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Polr1aO35134 CT030195.2-201ENSMUST00000226074 1286 ntBASIC17.33■□□□□ 0.37
Polr1aO35134 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.33■□□□□ 0.37
Polr1aO35134 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Gm37058-201ENSMUST00000193393 1644 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.33■□□□□ 0.36
Polr1aO35134 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Polr1aO35134 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC17.33■□□□□ 0.36
Polr1aO35134 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC17.33■□□□□ 0.36
Polr1aO35134 Gm11919-201ENSMUST00000117609 721 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Gm15031-201ENSMUST00000121341 210 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Gm26313-201ENSMUST00000157770 308 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Gm8643-201ENSMUST00000195228 625 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC17.33■□□□□ 0.36
Polr1aO35134 CT025679.1-201ENSMUST00000227106 449 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 BX649293.1-201ENSMUST00000227437 631 ntBASIC17.33■□□□□ 0.36
Polr1aO35134 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Polr1aO35134 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Nupl1-206ENSMUST00000225111 2936 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm20633-201ENSMUST00000176742 2831 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC17.32■□□□□ 0.36
Polr1aO35134 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC17.32■□□□□ 0.36
Polr1aO35134 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm22495-201ENSMUST00000104492 126 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC17.32■□□□□ 0.36
Polr1aO35134 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm24294-201ENSMUST00000158295 277 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm9574-201ENSMUST00000173127 845 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC17.32■□□□□ 0.36
Polr1aO35134 Gm18555-201ENSMUST00000197935 584 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Gm9644-201ENSMUST00000212828 1183 ntBASIC17.32■□□□□ 0.36
Polr1aO35134 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Polr1aO35134 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Polr1aO35134 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms