Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm8885-201ENSMUST00000189382 598 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm43962-201ENSMUST00000203898 190 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Pcdh1F7BJK1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 AC154849.3-201ENSMUST00000223733 1660 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm14726-201ENSMUST00000120623 896 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm6621-201ENSMUST00000193251 772 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm31256-201ENSMUST00000194705 506 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm44364-201ENSMUST00000198368 141 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm21769-201ENSMUST00000211922 111 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pcdh1F7BJK1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.31□□□□□ -0.76
Pcdh1F7BJK1 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms