Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Mir6923-201ENSMUST00000184592 72 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm45575-201ENSMUST00000210283 548 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.61□□□□□ -0.87
Usf3B2RUQ2 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.61□□□□□ -0.87
Usf3B2RUQ2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm11509-201ENSMUST00000117358 325 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm12164-201ENSMUST00000121695 551 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Mir7076-201ENSMUST00000183519 74 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm5434-202ENSMUST00000222384 1451 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm5434-201ENSMUST00000071825 1451 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm16166-201ENSMUST00000118291 787 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm43610-201ENSMUST00000199117 365 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usf3B2RUQ2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usf3B2RUQ2 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms