Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm25492-201ENSMUST00000157383 129 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm24398-201ENSMUST00000157870 109 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm20392-201ENSMUST00000173047 701 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.23□□□□□ -0.61
Chd3B1AR17 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd3B1AR17 Mir7051-201ENSMUST00000184167 73 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm8531-201ENSMUST00000188319 893 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm42779-201ENSMUST00000198807 406 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm18059-201ENSMUST00000208073 580 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.23□□□□□ -0.61
Chd3B1AR17 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Gm23680-201ENSMUST00000083162 164 ntBASIC11.23□□□□□ -0.61
Chd3B1AR17 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd3B1AR17 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm9353-201ENSMUST00000200472 604 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.22□□□□□ -0.61
Chd3B1AR17 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd3B1AR17 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd3B1AR17 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm13182-201ENSMUST00000122241 312 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm25951-201ENSMUST00000175330 64 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm26976-201ENSMUST00000182929 908 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.21□□□□□ -0.61
Chd3B1AR17 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Chd3B1AR17 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.21□□□□□ -0.61
Chd3B1AR17 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms