Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm14497-201ENSMUST00000119537 580 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm12783-201ENSMUST00000121425 397 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm20414-201ENSMUST00000172918 646 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm2594-201ENSMUST00000214774 742 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm26989-201ENSMUST00000182608 749 ntBASIC12.66□□□□□ -0.38
Scn3aA2ASI5 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn3aA2ASI5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm17221-201ENSMUST00000163909 481 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm17073-201ENSMUST00000168069 556 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm4862-201ENSMUST00000170405 438 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm43249-201ENSMUST00000200464 458 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm40879-201ENSMUST00000220759 612 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn3aA2ASI5 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn3aA2ASI5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Scn3aA2ASI5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Scn3aA2ASI5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms