Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hdac6Q9Z2V5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm11952-201ENSMUST00000121172 821 ntBASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm24954-201ENSMUST00000178831 110 ntBASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hdac6Q9Z2V5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hdac6Q9Z2V5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm9625-201ENSMUST00000180422 955 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm37197-201ENSMUST00000195607 401 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm43854-201ENSMUST00000200418 394 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm26782-203ENSMUST00000227103 751 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gm7589-201ENSMUST00000085631 534 ntBASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hdac6Q9Z2V5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hdac6Q9Z2V5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hdac6Q9Z2V5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac6Q9Z2V5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac6Q9Z2V5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hdac6Q9Z2V5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms