Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm29499-201ENSMUST00000189151 486 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm28329-201ENSMUST00000191208 689 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm29171-201ENSMUST00000191397 486 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 AU022133-201ENSMUST00000200601 873 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cldn9Q9Z0S7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm13035-201ENSMUST00000117496 342 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm12463-201ENSMUST00000118271 849 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm28450-201ENSMUST00000187349 638 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cldn9Q9Z0S7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Gm14028-201ENSMUST00000117434 479 ntBASIC11□□□□□ -0.65
Cldn9Q9Z0S7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms