Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Upk3aQ9JKX8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Upk3aQ9JKX8 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm23694-201ENSMUST00000179335 110 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm37458-201ENSMUST00000194055 410 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm18753-201ENSMUST00000201000 566 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Upk3aQ9JKX8 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm25076-201ENSMUST00000104098 132 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm37284-201ENSMUST00000193607 539 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm6439-201ENSMUST00000199849 862 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm45398-201ENSMUST00000210561 165 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk3aQ9JKX8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms