Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sh2d4aQ9D7V1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm6963-201ENSMUST00000147879 379 ntBASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sh2d4aQ9D7V1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gm11222-201ENSMUST00000119005 738 ntBASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gm3096-201ENSMUST00000185770 364 ntBASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh2d4aQ9D7V1 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms