Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 AC165148.1-201ENSMUST00000224795 2372 ntBASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps33aQ9D2N9 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm13570-201ENSMUST00000140763 309 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps33aQ9D2N9 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 Gm38321-201ENSMUST00000195053 235 ntBASIC12.1□□□□□ -0.47
Vps33aQ9D2N9 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms