Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.05□□□□□ -0.48
Retreg3Q9CQV4 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm15933-201ENSMUST00000117215 616 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm14550-201ENSMUST00000117918 407 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm11331-201ENSMUST00000119764 288 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm14503-201ENSMUST00000130337 1164 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm7891-201ENSMUST00000190284 843 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm43946-201ENSMUST00000204058 886 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm18255-201ENSMUST00000211316 765 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retreg3Q9CQV4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm14208-201ENSMUST00000119645 678 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm24749-201ENSMUST00000157838 343 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm9023-201ENSMUST00000198408 1038 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 AC159476.2-201ENSMUST00000216221 418 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 AV026068-225ENSMUST00000225042 490 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 AC123735.1-201ENSMUST00000227358 605 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm5564-201ENSMUST00000034916 967 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retreg3Q9CQV4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms