Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska1Q9CPV1 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm6963-201ENSMUST00000147879 379 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm5070-201ENSMUST00000177599 862 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm45598-202ENSMUST00000210719 986 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska1Q9CPV1 Gm21039-201ENSMUST00000223359 2012 ntBASIC10.85□□□□□ -0.67
Ska1Q9CPV1 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska1Q9CPV1 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms