Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Erich3-203ENSMUST00000189969 3460 ntBASIC12.35□□□□□ -0.43
Tlr3Q99MB1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm15595-201ENSMUST00000120840 961 ntBASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm7150-201ENSMUST00000122032 981 ntBASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm3150-201ENSMUST00000166418 204 ntBASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
Tlr3Q99MB1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Tlr3Q99MB1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tlr3Q99MB1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Tlr3Q99MB1 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tlr3Q99MB1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.33□□□□□ -0.44
Tlr3Q99MB1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Gm9540-201ENSMUST00000188230 478 ntBASIC12.33□□□□□ -0.44
Tlr3Q99MB1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tlr3Q99MB1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tlr3Q99MB1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms