Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm24809-201ENSMUST00000175318 271 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm9192-201ENSMUST00000183221 985 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm37365-201ENSMUST00000193109 409 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Mir181d-201ENSMUST00000102383 72 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm15329-201ENSMUST00000121408 155 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm15549-201ENSMUST00000121595 622 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm9162-201ENSMUST00000182081 991 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm5982-201ENSMUST00000196234 512 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm45527-201ENSMUST00000211052 774 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm26670-202ENSMUST00000226862 340 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.84□□□□□ -0.67
Nkx6-1Q99MA9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx6-1Q99MA9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms