Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm6478-201ENSMUST00000099450 742 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.16□□□□□ -0.14
RtcbQ99LF4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RtcbQ99LF4 Gm28424-201ENSMUST00000187393 1319 ntBASIC14.15□□□□□ -0.14
RtcbQ99LF4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Gm8384-201ENSMUST00000190905 704 ntBASIC14.15□□□□□ -0.14
RtcbQ99LF4 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RtcbQ99LF4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.15□□□□□ -0.14
RtcbQ99LF4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.15□□□□□ -0.14
RtcbQ99LF4 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
RtcbQ99LF4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm12337-201ENSMUST00000119634 400 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm9166-201ENSMUST00000120293 561 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm3828-201ENSMUST00000121817 257 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.14□□□□□ -0.15
RtcbQ99LF4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RtcbQ99LF4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm23255-201ENSMUST00000102244 110 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm27390-201ENSMUST00000184516 176 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Mir6953-201ENSMUST00000184745 68 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm20781-201ENSMUST00000193154 693 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm21736-201ENSMUST00000195399 693 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.13□□□□□ -0.15
RtcbQ99LF4 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.13□□□□□ -0.15
RtcbQ99LF4 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms