Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd2Q99JR8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Smarcd2Q99JR8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm11619-201ENSMUST00000117474 237 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm11578-201ENSMUST00000118530 459 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm13284-201ENSMUST00000121020 547 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Olfml3-204ENSMUST00000169286 874 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm8255-201ENSMUST00000218693 305 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm7525-201ENSMUST00000219425 454 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm8181-201ENSMUST00000062242 669 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd2Q99JR8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smarcd2Q99JR8 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.58□□□□□ -0.55
Smarcd2Q99JR8 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smarcd2Q99JR8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Gm5700-201ENSMUST00000191483 989 ntBASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd2Q99JR8 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms