Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm3096-201ENSMUST00000185770 364 ntBASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm44008-201ENSMUST00000204345 412 ntBASIC10.22□□□□□ -0.77
Thumpd1Q99J36 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Thumpd1Q99J36 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm14071-201ENSMUST00000117817 509 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm6963-201ENSMUST00000147879 379 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm5070-201ENSMUST00000177599 862 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm4857-201ENSMUST00000192718 785 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm45598-202ENSMUST00000210719 986 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Gm7653-201ENSMUST00000214567 508 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Thumpd1Q99J36 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Thumpd1Q99J36 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Thumpd1Q99J36 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms