Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm12463-201ENSMUST00000118271 849 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm24844-201ENSMUST00000158679 127 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm8342-201ENSMUST00000209839 757 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm6722-201ENSMUST00000221586 390 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.92□□□□□ -0.5
Pcdhb1Q91Y08 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm23251-201ENSMUST00000103773 110 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm14193-201ENSMUST00000105067 153 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm12176-201ENSMUST00000121420 875 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm25732-201ENSMUST00000175168 60 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm43138-201ENSMUST00000199123 708 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm6439-201ENSMUST00000199849 862 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm44506-201ENSMUST00000206278 965 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdhb1Q91Y08 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Gm37246-201ENSMUST00000192665 835 ntBASIC11.9□□□□□ -0.5
Pcdhb1Q91Y08 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms