Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhb3Q91XZ7 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdhb3Q91XZ7 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm16147-201ENSMUST00000162143 373 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm3890-201ENSMUST00000182416 207 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm38158-201ENSMUST00000194617 339 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm34701-202ENSMUST00000204685 360 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 AC121986.1-201ENSMUST00000218588 781 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm5781-201ENSMUST00000219792 443 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 AC160962.2-201ENSMUST00000224761 632 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm9575-201ENSMUST00000122140 1339 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhb3Q91XZ7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Mir466f-2-201ENSMUST00000104805 94 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm13492-201ENSMUST00000119772 665 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm12502-201ENSMUST00000120197 444 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm11835-201ENSMUST00000120635 663 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm24548-201ENSMUST00000158650 108 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm6590-201ENSMUST00000203343 687 ntBASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhb3Q91XZ7 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms