Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mir8115-201ENSMUST00000184992 119 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gm10829-201ENSMUST00000202084 2988 ntBASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ddx41Q91VN6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm8737-201ENSMUST00000122208 642 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm8365-201ENSMUST00000197334 648 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm10752-201ENSMUST00000218348 729 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ddx41Q91VN6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Cog3-203ENSMUST00000227473 4197 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm11949-201ENSMUST00000117640 372 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm23045-201ENSMUST00000175041 96 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm43186-201ENSMUST00000198130 824 ntBASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx41Q91VN6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms