Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm8197-202ENSMUST00000193422 934 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm45594-201ENSMUST00000211717 241 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm5468-202ENSMUST00000227851 682 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TraipQ8VIG6 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.36□□□□□ -0.43
TraipQ8VIG6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm12274-201ENSMUST00000120062 385 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm15329-201ENSMUST00000121408 155 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm23617-201ENSMUST00000175410 95 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm21778-201ENSMUST00000178779 471 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm28324-201ENSMUST00000187913 264 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm37826-201ENSMUST00000195329 322 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm44008-201ENSMUST00000204345 412 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gpr87-201ENSMUST00000056898 1080 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm10263-201ENSMUST00000085163 300 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm17415-201ENSMUST00000096427 789 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.35□□□□□ -0.43
TraipQ8VIG6 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TraipQ8VIG6 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms