Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm25700-201ENSMUST00000177693 110 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm9257-201ENSMUST00000221254 232 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.86□□□□□ -0.51
Trim60Q8VI40 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim60Q8VI40 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Btrc-209ENSMUST00000224478 2194 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm24255-201ENSMUST00000104481 128 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm11509-201ENSMUST00000117358 325 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm26361-201ENSMUST00000158868 186 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm38341-201ENSMUST00000195357 515 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm3961-201ENSMUST00000204425 994 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm270-201ENSMUST00000223010 976 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.85□□□□□ -0.51
Trim60Q8VI40 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim60Q8VI40 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.84□□□□□ -0.51
Trim60Q8VI40 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim60Q8VI40 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms