Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cdhr1Q8VHP6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cdhr1Q8VHP6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm23272-201ENSMUST00000104053 129 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm12795-201ENSMUST00000117594 539 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm14942-201ENSMUST00000119642 336 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Mir1956-201ENSMUST00000157748 65 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm28324-201ENSMUST00000187913 264 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm37905-201ENSMUST00000195310 341 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm43058-201ENSMUST00000197645 625 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm4978-201ENSMUST00000071565 801 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm5451-201ENSMUST00000080545 579 ntBASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cdhr1Q8VHP6 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdhr1Q8VHP6 Gm26013-201ENSMUST00000104404 119 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms