Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.82□□□□□ -0.68
Clrn1Q8K445 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Clrn1Q8K445 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm15595-201ENSMUST00000120840 961 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm20495-201ENSMUST00000173902 235 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Clrn1Q8K445 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm3329-201ENSMUST00000159873 556 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.8□□□□□ -0.68
Clrn1Q8K445 Gm12407-201ENSMUST00000180219 324 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms