Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc5Q8CG46 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm25148-201ENSMUST00000104611 123 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm20482-202ENSMUST00000174729 825 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm38266-201ENSMUST00000194931 421 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gm45041-201ENSMUST00000207366 3108 ntBASIC14.14□□□□□ -0.15
Smc5Q8CG46 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc5Q8CG46 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm15711-201ENSMUST00000118889 535 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm15617-201ENSMUST00000118973 771 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm24749-201ENSMUST00000157838 343 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm26361-201ENSMUST00000158868 186 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm45575-201ENSMUST00000210283 548 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.13□□□□□ -0.15
Smc5Q8CG46 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smc5Q8CG46 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smc5Q8CG46 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms