Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm5714-201ENSMUST00000197343 566 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm6867-201ENSMUST00000219165 425 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc38Q8CDN8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm8815-201ENSMUST00000173809 620 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc38Q8CDN8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm14724-201ENSMUST00000118400 537 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm26047-201ENSMUST00000157308 113 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm10807-201ENSMUST00000177134 795 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Gm26047-202ENSMUST00000198840 115 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc38Q8CDN8 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms