Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm8913-201ENSMUST00000209491 641 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm8385-201ENSMUST00000058999 643 ntBASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc87Q8CDL9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm11511-201ENSMUST00000118146 540 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm18753-201ENSMUST00000201000 566 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm17812-201ENSMUST00000204935 318 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm4607-201ENSMUST00000206649 577 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm45433-201ENSMUST00000209386 247 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc87Q8CDL9 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc87Q8CDL9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms