Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm8018-201ENSMUST00000173536 789 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm27516-201ENSMUST00000184237 98 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm43179-201ENSMUST00000198797 275 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Gm3961-201ENSMUST00000204425 994 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Morn2-202ENSMUST00000227729 656 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Tsen54Q8C2A2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm12058-201ENSMUST00000118614 437 ntBASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm9136-201ENSMUST00000193368 454 ntBASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Gm6439-201ENSMUST00000199849 862 ntBASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Spata33-207ENSMUST00000212760 4074 ntBASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Tsen54Q8C2A2 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms