Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm37835-201ENSMUST00000193305 361 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Ska3Q8C263 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Rgr-203ENSMUST00000225070 4704 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.83□□□□□ -0.68
Ska3Q8C263 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Ska3Q8C263 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Ska3Q8C263 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm14193-201ENSMUST00000105067 153 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.82□□□□□ -0.68
Ska3Q8C263 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm8459-201ENSMUST00000162504 760 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm12407-201ENSMUST00000180219 324 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm19353-201ENSMUST00000184561 445 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Gm43002-201ENSMUST00000200310 155 ntBASIC10.82□□□□□ -0.68
Ska3Q8C263 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.82□□□□□ -0.68
Ska3Q8C263 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska3Q8C263 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska3Q8C263 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.81□□□□□ -0.68
Ska3Q8C263 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska3Q8C263 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms